PATOQ

Welcome

BIOINFORMATICS · DATA SCIENCE · MACHINE LEARNING

PATOQ (پاتوق) is a curated collection of practical resources and quick tutorials for bioinformatics, computational biology, data science, machine learning, and related fields.

Patoq is a Persian word for a gathering place—a space where people exchange ideas, learn together, and keep up with a fast-moving field.

Cover setting — Persepolis. The cover imagines a modern scientific gathering at Persepolis, the Achaemenid capital founded by Darius I around 518 BCE on a monumental terrace in present-day Fars, Iran. Explore Persepolis at the UNESCO World Heritage Centre →

Start with the prerequisites Contribute on GitHub

Choose a path

Build the foundations

Refresh the biology, mathematics, statistics, Linux, Git, R, and Python concepts that support computational research.

Browse prerequisites →

Explore biological data

Move through genomics, transcriptomics, proteomics, metabolomics, epigenomics, and metagenomics resources.

Explore omics data →

Find tools and workflows

Discover workflow systems, cloud and HPC resources, visualization approaches, platforms, courses, and references.

Open the toolkit →

PATOQ is an open, Quarto-based online book. Contributor: Hossein Asadkhanipour